Metabarcoding and Metagenomics 9

Short Communication

Constraining lake ecology via metagenomics, metatranscriptomics, and amplicon sequencing

Julia K. Nuy, Till L. V. Bornemann, Daniela Beisser, Alexander J. Probst, Jens Boenigk

10.3897/mbmg.9.156215

01-12-2025

Unique: 355 | Total: 422

Reprint: € 7,00

Research Article

Barley Rhizosphere Bacteriome Dynamics under Organic and Mineral Inputs: The importance of intercropping predecessor

Stefan Shilev, Mariana Petkova, Vanya Popova, Ivelina Neykova, Ivan Rangelov

10.3897/mbmg.9.167231

18-11-2025

Unique: 326 | Total: 384

Reprint: € 11,00

Research Article

A DNA metabarcoding workflow for the detection of terrestrial gastropods from ingested DNA

Mathis Ventura, Nicolas Mazuras, Shanèze Noël, Lise Dupont, Virginie Roy

10.3897/mbmg.9.161359

05-11-2025

Unique: 678 | Total: 820

Reprint: € 13,00

Research Article

Metabarcoding outperforms traditional electrofishing in decapod and fish inventories, paving the way for enhanced biodiversity monitoring in the Caribbean

Thomas Baudry, Valentin Vasselon, Carine Delaunay, Alexandre Arqué, Fabian Rateau, Géraldine Lala, Claire Maurice-Madelon, Frédéric Grandjean

10.3897/mbmg.9.151675

03-11-2025

Unique: 487 | Total: 584

Reprint: € 9,00

Primer Validation

The design and testing of taxon-specific mini-barcode markers for metabarcoding of marine zooplankton

Saiesha Harpal, Johan Groeneveld, Sandi Willows-Munro, Jenny Huggett, Ashrenee Govender

10.3897/mbmg.9.161301

23-10-2025

Unique: 534 | Total: 780

Reprint: € 8,00

Research Article

Invasive species monitoring based on eDNA multiplex PCR sequencing

Zheyuan Liu, Xiaoru Du, Zehua Zhang, Yawen Mu, Jianghua Yang, Jiaxin Yang, Xiaowei Zhang

10.3897/mbmg.9.159944

14-10-2025

Unique: 873 | Total: 1067

Reprint: € 8,00

Surface swabs outperform most traditional ...

Research Article

2025 Editors' Choice

Surface swabs outperform most traditional honeybee (Apis mellifera) hive samples for recovery of eDNA and eRNA

Erin Hill, Liz Milla, Francisco Encinas-Viso, James O'Dwyer, Ben Gooden, Mariana Hopper, John Roberts

10.3897/mbmg.9.165436

10-10-2025

Unique: 622 | Total: 816

Reprint: € 12,00

Research Article

A comparative analysis of hybridisation capture and PCR-based eDNA metabarcoding for monitoring bryophytes in riparian ecosystems

Thomas Reinhart, Armando Espinosa Prieto, Thomas Begoc, Hugues Tinguy, Francis Bick, Etienne Chanez, Jean-Nicolas Beisel, Laurent Hardion

10.3897/mbmg.9.154548

08-10-2025

Unique: 665 | Total: 813

Reprint: € 8,00

Research Article

From short to long reads: enhanced protist diversity profiling via Nanopore metabarcoding

Małgorzata Chwalińska, Michał Karlicki, Sarah Romac, Fabrice Not, Anna Karnkowska

10.3897/mbmg.9.163750

08-10-2025

Unique: 843 | Total: 1144

Reprint: € 11,00

Research Article

Evaluating the potential of DNA metabarcoding for ecological status assessment under the Water Framework Directive: A case study on benthic invertebrates from Western Carpathian streams

Michaela Šamulková, Pavel Beracko, Patrik Macko, Ondrej Vargovčík, Kornélia Tuhrinová, Zuzana Čiamporová-Zaťovičová, Margita Lešťáková, Emília Mišíková Elexová, Fedor Čiampor Jr

10.3897/mbmg.9.163640

01-10-2025

Unique: 571 | Total: 731

Reprint: € 11,00

Research Article

From Asia through America to Europe: Molecular and morphological evidence for a non-indigenous diatom species, Discostella asterocostata (B.Q.Lin, S.Q.Xie & S.X.Cai) Houk & Klee in Hungary and Croatia

10.3897/mbmg.9.154667

01-09-2025

Unique: 657 | Total: 808

Reprint: € 11,00