Metabarcoding and Metagenomics 4

Software Description

BOLDigger – a Python package to identify and organise sequences with the Barcode of Life Data systems

Dominik Buchner, Florian Leese

10.3897/mbmg.4.53535

03-06-2020

Unique: 6858 | Total: 12021

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Research Article

Can metabarcoding resolve intraspecific genetic diversity changes to environmental stressors? A test case using river macrozoobenthos

Vera Marie Alida Zizka, Martina Weiss, Florian Leese

10.3897/mbmg.4.51925

24-07-2020

Unique: 3970 | Total: 6588

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Research Article

Assessment of species gaps in DNA barcode libraries of non-indigenous species (NIS) occurring in European coastal regions

Sofia Duarte, Pedro E. Vieira, Filipe O. Costa

10.3897/mbmg.4.55162

12-08-2020

Unique: 3548 | Total: 5962

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Research Article

Increasing confidence for discerning species and population compositions from metabarcoding assays of environmental samples: case studies of fishes in the Laurentian Great Lakes and Wabash River

Matthew R. Snyder, Carol A. Stepien

10.3897/mbmg.4.53455

26-08-2020

Unique: 3890 | Total: 8339

Reprint: € 8,00

Research Article

Exploring the potential of metabarcoding to disentangle macroinvertebrate community dynamics in intermittent streams

Alex Laini, Arne J. Beermann, Rossano Bolpagni, Gemma Burgazzi, Vasco Elbrecht, Vera M. A. Zizka, Florian Leese, Pierluigi Viaroli

10.3897/mbmg.4.51433

28-08-2020

Unique: 3493 | Total: 6236

Reprint: € 7,00

Software Description

Alignment-free classification of COI DNA barcode data with the Python package Alfie

Cameron M. Nugent, Sarah J. Adamowicz

10.3897/mbmg.4.55815

10-09-2020

Unique: 4467 | Total: 9300

Reprint: € 6,00

Data Paper

The mitochondrial genomes of 11 aquatic macroinvertebrate species from Cyprus

Jan-Niklas Macher, Katerina Drakou, Athina Papatheodoulou, Berry van der Hoorn, Marlen Vasquez

10.3897/mbmg.4.58259

21-09-2020

Unique: 2714 | Total: 3981

Reprint: € 5,00

Research Article

Read counts from environmental DNA (eDNA) metabarcoding reflect fish abundance and biomass in drained ponds

Cristina Di Muri, Lori Lawson Handley, Colin W. Bean, Jianlong Li, Graeme Peirson, Graham S. Sellers, Kerry Walsh, Hayley V. Watson, Ian J. Winfield, Bernd Hänfling

10.3897/mbmg.4.56959

22-10-2020

Unique: 8393 | Total: 14215

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Research Article

Using DNA metabarcoding to investigate diet and niche partitioning in the native European otter (Lutra lutra) and invasive American mink (Neovison vison)

Lynsey R. Harper, Hayley V. Watson, Robert Donnelly, Richard Hampshire, Carl D. Sayer, Thomas Breithaupt, Bernd Hänfling

10.3897/mbmg.4.56087

26-11-2020

Unique: 5186 | Total: 9211

Reprint: € 9,00

Methods

Soil stabilisation for DNA metabarcoding of plants and fungi. Implications for sampling at remote locations or via third-parties

Lina A. Clasen, Andrew P. Detheridge, John Scullion, Gareth W. Griffith

10.3897/mbmg.4.58365

26-11-2020

Unique: 4298 | Total: 6299

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Corrigendum

Corrigendum: Using DNA metabarcoding for assessing chironomid diversity and community change in mosquito controlled temporary wetlands. MBMG 2: e21060. https://doi.org/10.3897/mbmg.2.21060

Kathrin Theissinger, Anna Kästel, Vasco Elbrecht, Jenny Makkonen, Susanne Michiels, Susanne I. Schmidt, Stefanie Allgeier, Florian Leese, Carsten A. Brühl

10.3897/mbmg.4.60854

11-12-2020

Unique: 2324 | Total: 3514

Reprint: € 3,00

Monitoring Schema

Methodological considerations for monitoring soil/litter arthropods in tropical rainforests using DNA metabarcoding, with a special emphasis on ants, springtails and termites

10.3897/mbmg.4.58572

31-12-2020

Unique: 4149 | Total: 6265

Reprint: € 7,00