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Research Article
Beyond fish eDNA metabarcoding: Field replicates disproportionately improve the detection of stream associated vertebrate species
Till-Hendrik Macher
,
Robin Schütz
,
Jens Arle
,
Arne J. Beermann
,
Jan Koschorreck
,
Florian Leese
Part of: DNA and eDNA methods for bioassessment and monitoring: Steps towards formal implementation
10.3897/mbmg.5.66557
13-07-2021
Unique: 7287 | Total: 9978
| Access Period: 2830
Reprint: € 7,00
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Research Article
Development and evaluation of PCR primers for environmental DNA (eDNA) metabarcoding of Amphibia
Masayuki K. Sakata
,
Mone U. Kawata
,
Atsushi Kurabayashi
,
Takaki Kurita
,
Masatoshi Nakamura
,
Tomoyasu Shirako
,
Ryosuke Kakehashi
,
Kanto Nishikawa
,
Mohamad Yazid Hossman
,
Takashi Nishijima
,
Junichi Kabamoto
,
Masaki Miya
,
Toshifumi Minamoto
10.3897/mbmg.6.76534
21-02-2022
Unique: 7002 | Total: 12452
| Access Period: 1518
Reprint: € 6,00
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Primer Validation
Evaluating five primer pairs for environmental DNA metabarcoding of Central European fish species based on mock communities
Till-Hendrik Macher
,
Robin Schütz
,
Atakan Yildiz
,
Arne J. Beermann
,
Florian Leese
10.3897/mbmg.7.103856
05-09-2023
Unique: 3358 | Total: 5044
| Access Period: 1463
Reprint: € 12,00
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Primer Validation
Short COI markers for freshwater macroinvertebrate metabarcoding
Ecaterina Vamos
,
Vasco Elbrecht
,
Florian Leese
10.3897/mbmg.1.14625
20-09-2017
Unique: 9165 | Total: 16320
| Access Period: 1373
Reprint: € 8,00
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Case Study
The use of citizen science in fish eDNA metabarcoding for evaluating regional biodiversity in a coastal marine region: A pilot study
Masaki Miya
,
Tetsuya Sado
,
Shin-ichiro Oka
,
Takehiko Fukuchi
10.3897/mbmg.6.80444
23-05-2022
Unique: 5706 | Total: 12539
| Access Period: 1348
Reprint: € 6,00
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Research Article
Nanopore duplex sequencing as an alternative to Illumina MiSeq sequencing for eDNA-based biomonitoring of coastal aquaculture impacts
Thorsten Stoeck
,
Sven Nicolai Katzenmeier
,
Hans-Werner Breiner
,
Verena Rubel
10.3897/mbmg.8.121817
29-05-2024
Unique: 1726 | Total: 3135
| Access Period: 1148
Reprint: € 9,00
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Primer Validation
Development of a new set of PCR primers for eDNA metabarcoding decapod crustaceans
Tomoyuki Komai
,
Ryo O. Gotoh
,
Tetsuya Sado
,
Masaki Miya
10.3897/mbmg.3.33835
24-04-2019
Unique: 8147 | Total: 14103
| Access Period: 1114
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Research Article
Comparing PCR-generated artifacts of different polymerases for improved accuracy of DNA metabarcoding
Satoshi Nagai
,
Sirje Sildever
,
Noriko Nishi
,
Satoshi Tazawa
,
Leila Basti
,
Takanori Kobayashi
,
Yoshizumi Ishino
10.3897/mbmg.6.77704
21-02-2022
Unique: 7570 | Total: 11458
| Access Period: 1055
Reprint: € 7,00
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Software Description
BOLDigger – a Python package to identify and organise sequences with the Barcode of Life Data systems
Dominik Buchner
,
Florian Leese
10.3897/mbmg.4.53535
03-06-2020
Unique: 5947 | Total: 10335
| Access Period: 960
Reprint: € 3,00
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Methods
Mu-DNA: a modular universal DNA extraction method adaptable for a wide range of sample types
Graham S. Sellers
,
Cristina Di Muri
,
Africa Gómez
,
Bernd Hänfling
10.3897/mbmg.2.24556
05-07-2018
Unique: 11263 | Total: 18644
| Access Period: 870
Reprint: € 6,00
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Research Article
Read counts from environmental DNA (eDNA) metabarcoding reflect fish abundance and biomass in drained ponds
Cristina Di Muri
,
Lori Lawson Handley
,
Colin W. Bean
,
Jianlong Li
,
Graeme Peirson
,
Graham S. Sellers
,
Kerry Walsh
,
Hayley V. Watson
,
Ian J. Winfield
,
Bernd Hänfling
10.3897/mbmg.4.56959
22-10-2020
Unique: 7442 | Total: 12272
| Access Period: 858
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Review Article
Abundance estimation with DNA metabarcoding – recent advancements for terrestrial arthropods
Wiebke Sickel
,
Vera Zizka
,
Alice Scherges
,
Sarah J. Bourlat
,
Petra Dieker
10.3897/mbmg.7.112290
23-11-2023
Unique: 2580 | Total: 4587
| Access Period: 810
Reprint: € 13,00
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