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Case Study
The use of citizen science in fish eDNA metabarcoding for evaluating regional biodiversity in a coastal marine region: A pilot study
Masaki Miya
,
Tetsuya Sado
,
Shin-ichiro Oka
,
Takehiko Fukuchi
10.3897/mbmg.6.80444
23-05-2022
Unique: 2708 | Total: 6454
| Access Period: 3605
Reprint: € 6,30
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Research Article
Development and evaluation of PCR primers for environmental DNA (eDNA) metabarcoding of Amphibia
Masayuki K. Sakata
,
Mone U. Kawata
,
Atsushi Kurabayashi
,
Takaki Kurita
,
Masatoshi Nakamura
,
Tomoyasu Shirako
,
Ryosuke Kakehashi
,
Kanto Nishikawa
,
Mohamad Yazid Hossman
,
Takashi Nishijima
,
Junichi Kabamoto
,
Masaki Miya
,
Toshifumi Minamoto
10.3897/mbmg.6.76534
21-02-2022
Unique: 3821 | Total: 7310
| Access Period: 1181
Reprint: € 6,30
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Research Article
Metabarcoding of soil nematodes: the importance of taxonomic coverage and availability of reference sequences in choosing suitable marker(s)
Mohammed Ahmed
,
Matthew Alan Back
,
Thomas Prior
,
Gerrit Karssen
,
Rebecca Lawson
,
Ian Adams
,
Melanie Sapp
10.3897/mbmg.3.36408
06-11-2019
Unique: 4619 | Total: 9190
| Access Period: 999
Reprint: € 9,90
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Research Article
Can the Eurasian otter (
Lutra lutra
) be used as an effective sampler of fish diversity? Using molecular assessment of otter diet to survey fish communities
Hailong Dou
,
Mi Wang
,
Xuwang Yin
,
Limin Feng
,
Haitao Yang
10.3897/mbmg.7.96733
21-02-2023
Unique: 884 | Total: 1983
| Access Period: 835
Reprint: € 8,70
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Primer Validation
Short COI markers for freshwater macroinvertebrate metabarcoding
Ecaterina Vamos
,
Vasco Elbrecht
,
Florian Leese
10.3897/mbmg.1.14625
20-09-2017
Unique: 6905 | Total: 12340
| Access Period: 767
Reprint: € 8,70
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Primer Validation
Internal transcribed spacer primer evaluation for vascular plant metabarcoding
Andreas Kolter
,
Birgit Gemeinholzer
10.3897/mbmg.5.68155
02-09-2021
Unique: 2437 | Total: 4532
| Access Period: 678
Reprint: € 8,70
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Research Article
Comparing PCR-generated artifacts of different polymerases for improved accuracy of DNA metabarcoding
Satoshi Nagai
,
Sirje Sildever
,
Noriko Nishi
,
Satoshi Tazawa
,
Leila Basti
,
Takanori Kobayashi
,
Yoshizumi Ishino
10.3897/mbmg.6.77704
21-02-2022
Unique: 3908 | Total: 6227
| Access Period: 663
Reprint: € 7,50
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Methods
Mu-DNA: a modular universal DNA extraction method adaptable for a wide range of sample types
Graham S. Sellers
,
Cristina Di Muri
,
Africa Gómez
,
Bernd Hänfling
10.3897/mbmg.2.24556
05-07-2018
Unique: 8133 | Total: 13969
| Access Period: 660
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Research Article
Read counts from environmental DNA (eDNA) metabarcoding reflect fish abundance and biomass in drained ponds
Cristina Di Muri
,
Lori Lawson Handley
,
Colin W. Bean
,
Jianlong Li
,
Graeme Peirson
,
Graham S. Sellers
,
Kerry Walsh
,
Hayley V. Watson
,
Ian J. Winfield
,
Bernd Hänfling
10.3897/mbmg.4.56959
22-10-2020
Unique: 5321 | Total: 9173
| Access Period: 657
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Software Description
BOLDigger – a Python package to identify and organise sequences with the Barcode of Life Data systems
Dominik Buchner
,
Florian Leese
10.3897/mbmg.4.53535
03-06-2020
Unique: 3850 | Total: 6664
| Access Period: 653
Reprint: € 3,90
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Research Article
Quantitative monitoring of multispecies fish environmental DNA using high-throughput sequencing
Masayuki Ushio
,
Hiroaki Murakami
,
Reiji Masuda
,
Tetsuya Sado
,
Masaki Miya
,
Sho Sakurai
,
Hiroki Yamanaka
,
Toshifumi Minamoto
,
Michio Kondoh
10.3897/mbmg.2.23297
14-03-2018
Unique: 6941 | Total: 13319
| Access Period: 606
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Research Article
Assessing the lysis of diverse pollen from bulk environmental samples for DNA metabarcoding
Madison A. Moore
,
Melissa K.R. Scheible
,
James B. Robertson
,
Kelly A. Meiklejohn
10.3897/mbmg.6.89753
23-09-2022
Unique: 1072 | Total: 2552
| Access Period: 596
Reprint: € 6,30
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