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Case Study
The use of citizen science in fish eDNA metabarcoding for evaluating regional biodiversity in a coastal marine region: A pilot study
Masaki Miya
,
Tetsuya Sado
,
Shin-ichiro Oka
,
Takehiko Fukuchi
10.3897/mbmg.6.80444
23-05-2022
Unique: 4397 | Total: 9748
| Access Period: 2393
Reprint: € 6,30
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Methods
Mu-DNA: a modular universal DNA extraction method adaptable for a wide range of sample types
Graham S. Sellers
,
Cristina Di Muri
,
Africa Gómez
,
Bernd Hänfling
10.3897/mbmg.2.24556
05-07-2018
Unique: 9852 | Total: 16335
| Access Period: 1601
Reprint: € 6,30
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Research Article
Development and evaluation of PCR primers for environmental DNA (eDNA) metabarcoding of Amphibia
Masayuki K. Sakata
,
Mone U. Kawata
,
Atsushi Kurabayashi
,
Takaki Kurita
,
Masatoshi Nakamura
,
Tomoyasu Shirako
,
Ryosuke Kakehashi
,
Kanto Nishikawa
,
Mohamad Yazid Hossman
,
Takashi Nishijima
,
Junichi Kabamoto
,
Masaki Miya
,
Toshifumi Minamoto
10.3897/mbmg.6.76534
21-02-2022
Unique: 5436 | Total: 9660
| Access Period: 1421
Reprint: € 6,30
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Primer Validation
Short COI markers for freshwater macroinvertebrate metabarcoding
Ecaterina Vamos
,
Vasco Elbrecht
,
Florian Leese
10.3897/mbmg.1.14625
20-09-2017
Unique: 7838 | Total: 13893
| Access Period: 1169
Reprint: € 8,70
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Research Article
Metabarcoding of soil nematodes: the importance of taxonomic coverage and availability of reference sequences in choosing suitable marker(s)
Mohammed Ahmed
,
Matthew Alan Back
,
Thomas Prior
,
Gerrit Karssen
,
Rebecca Lawson
,
Ian Adams
,
Melanie Sapp
10.3897/mbmg.3.36408
06-11-2019
Unique: 5445 | Total: 10707
| Access Period: 1073
Reprint: € 9,90
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Primer Validation
Evaluating five primer pairs for environmental DNA metabarcoding of Central European fish species based on mock communities
Till-Hendrik Macher
,
Robin Schütz
,
Atakan Yildiz
,
Arne J. Beermann
,
Florian Leese
10.3897/mbmg.7.103856
05-09-2023
Unique: 1662 | Total: 2376
| Access Period: 1068
Reprint: € 12,30
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Software Description
Natrix2 – Improved amplicon workflow with novel Oxford Nanopore Technologies support and enhancements in clustering, classification and taxonomic databases
Aman Deep
,
Dana Bludau
,
Marius Welzel
,
Sandra Clemens
,
Dominik Heider
,
Jens Boenigk
,
Daniela Beisser
10.3897/mbmg.7.109389
24-10-2023
Unique: 1250 | Total: 2110
| Access Period: 1033
Reprint: € 6,30
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Research Article
Quantitative monitoring of multispecies fish environmental DNA using high-throughput sequencing
Masayuki Ushio
,
Hiroaki Murakami
,
Reiji Masuda
,
Tetsuya Sado
,
Masaki Miya
,
Sho Sakurai
,
Hiroki Yamanaka
,
Toshifumi Minamoto
,
Michio Kondoh
10.3897/mbmg.2.23297
14-03-2018
Unique: 7841 | Total: 14813
| Access Period: 1021
Reprint: € 7,50
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Review Article
Abundance estimation with DNA metabarcoding – recent advancements for terrestrial arthropods
Wiebke Sickel
,
Vera Zizka
,
Alice Scherges
,
Sarah J. Bourlat
,
Petra Dieker
10.3897/mbmg.7.112290
23-11-2023
Unique: 1161 | Total: 1592
| Access Period: 896
Reprint: € 13,50
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Software Description
BOLDigger – a Python package to identify and organise sequences with the Barcode of Life Data systems
Dominik Buchner
,
Florian Leese
10.3897/mbmg.4.53535
03-06-2020
Unique: 4720 | Total: 7982
| Access Period: 867
Reprint: € 3,90
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Research Article
Read counts from environmental DNA (eDNA) metabarcoding reflect fish abundance and biomass in drained ponds
Cristina Di Muri
,
Lori Lawson Handley
,
Colin W. Bean
,
Jianlong Li
,
Graeme Peirson
,
Graham S. Sellers
,
Kerry Walsh
,
Hayley V. Watson
,
Ian J. Winfield
,
Bernd Hänfling
10.3897/mbmg.4.56959
22-10-2020
Unique: 6320 | Total: 10507
| Access Period: 817
Reprint: € 7,50
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Research Article
Comparing PCR-generated artifacts of different polymerases for improved accuracy of DNA metabarcoding
Satoshi Nagai
,
Sirje Sildever
,
Noriko Nishi
,
Satoshi Tazawa
,
Leila Basti
,
Takanori Kobayashi
,
Yoshizumi Ishino
10.3897/mbmg.6.77704
21-02-2022
Unique: 5651 | Total: 8615
| Access Period: 776
Reprint: € 7,50
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