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Research Article
Beyond fish eDNA metabarcoding: Field replicates disproportionately improve the detection of stream associated vertebrate species
Till-Hendrik Macher
,
Robin Schütz
,
Jens Arle
,
Arne J. Beermann
,
Jan Koschorreck
,
Florian Leese
Part of: DNA and eDNA methods for bioassessment and monitoring: Steps towards formal implementation
10.3897/mbmg.5.66557
13-07-2021
Unique: 7020 | Total: 9598
| Access Period: 2805
Reprint: € 7,00
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Research Article
Development and evaluation of PCR primers for environmental DNA (eDNA) metabarcoding of Amphibia
Masayuki K. Sakata
,
Mone U. Kawata
,
Atsushi Kurabayashi
,
Takaki Kurita
,
Masatoshi Nakamura
,
Tomoyasu Shirako
,
Ryosuke Kakehashi
,
Kanto Nishikawa
,
Mohamad Yazid Hossman
,
Takashi Nishijima
,
Junichi Kabamoto
,
Masaki Miya
,
Toshifumi Minamoto
10.3897/mbmg.6.76534
21-02-2022
Unique: 6641 | Total: 11719
| Access Period: 1394
Reprint: € 6,00
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Primer Validation
Evaluating five primer pairs for environmental DNA metabarcoding of Central European fish species based on mock communities
Till-Hendrik Macher
,
Robin Schütz
,
Atakan Yildiz
,
Arne J. Beermann
,
Florian Leese
10.3897/mbmg.7.103856
05-09-2023
Unique: 2901 | Total: 4402
| Access Period: 1362
Reprint: € 12,00
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Software Description
BOLDigger – a Python package to identify and organise sequences with the Barcode of Life Data systems
Dominik Buchner
,
Florian Leese
10.3897/mbmg.4.53535
03-06-2020
Unique: 5647 | Total: 9830
| Access Period: 1293
Reprint: € 3,00
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Primer Validation
Short COI markers for freshwater macroinvertebrate metabarcoding
Ecaterina Vamos
,
Vasco Elbrecht
,
Florian Leese
10.3897/mbmg.1.14625
20-09-2017
Unique: 8770 | Total: 15622
| Access Period: 1231
Reprint: € 8,00
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Case Study
The use of citizen science in fish eDNA metabarcoding for evaluating regional biodiversity in a coastal marine region: A pilot study
Masaki Miya
,
Tetsuya Sado
,
Shin-ichiro Oka
,
Takehiko Fukuchi
10.3897/mbmg.6.80444
23-05-2022
Unique: 5352 | Total: 11711
| Access Period: 1184
Reprint: € 6,00
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Methods
Mu-DNA: a modular universal DNA extraction method adaptable for a wide range of sample types
Graham S. Sellers
,
Cristina Di Muri
,
Africa Gómez
,
Bernd Hänfling
10.3897/mbmg.2.24556
05-07-2018
Unique: 10966 | Total: 18146
| Access Period: 1151
Reprint: € 6,00
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Research Article
Nanopore duplex sequencing as an alternative to Illumina MiSeq sequencing for eDNA-based biomonitoring of coastal aquaculture impacts
Thorsten Stoeck
,
Sven Nicolai Katzenmeier
,
Hans-Werner Breiner
,
Verena Rubel
10.3897/mbmg.8.121817
29-05-2024
Unique: 1293 | Total: 2432
| Access Period: 964
Reprint: € 9,00
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Primer Validation
Development of a new set of PCR primers for eDNA metabarcoding decapod crustaceans
Tomoyuki Komai
,
Ryo O. Gotoh
,
Tetsuya Sado
,
Masaki Miya
10.3897/mbmg.3.33835
24-04-2019
Unique: 7810 | Total: 13446
| Access Period: 948
Reprint: € 8,00
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Review Article
Abundance estimation with DNA metabarcoding – recent advancements for terrestrial arthropods
Wiebke Sickel
,
Vera Zizka
,
Alice Scherges
,
Sarah J. Bourlat
,
Petra Dieker
10.3897/mbmg.7.112290
23-11-2023
Unique: 2277 | Total: 4135
| Access Period: 941
Reprint: € 13,00
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Research Article
Comparing PCR-generated artifacts of different polymerases for improved accuracy of DNA metabarcoding
Satoshi Nagai
,
Sirje Sildever
,
Noriko Nishi
,
Satoshi Tazawa
,
Leila Basti
,
Takanori Kobayashi
,
Yoshizumi Ishino
10.3897/mbmg.6.77704
21-02-2022
Unique: 7109 | Total: 10748
| Access Period: 928
Reprint: € 7,00
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Software Description
Natrix2 – Improved amplicon workflow with novel Oxford Nanopore Technologies support and enhancements in clustering, classification and taxonomic databases
Aman Deep
,
Dana Bludau
,
Marius Welzel
,
Sandra Clemens
,
Dominik Heider
,
Jens Boenigk
,
Daniela Beisser
10.3897/mbmg.7.109389
24-10-2023
Unique: 2374 | Total: 3924
| Access Period: 880
Reprint: € 6,00
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