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R Package
BBI: an R package for the computation of Benthic Biotic Indices from composition data
Tristan Cordier
,
Jan Pawlowski
10.3897/mbmg.2.25649
05-07-2018
Unique: 5437 | Total: 42274
| Access Period:
Reprint: € 3,00
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Research Article
Molecular versus morphological data for benthic diatoms biomonitoring in Northern Europe freshwater and consequences for ecological status
Bonnie Bailet
,
Agnes Bouchez
,
Alain Franc
,
Jean-Marc Frigerio
,
François Keck
,
Satu-Maaria Karjalainen
,
Frederic Rimet
,
Susanne Schneider
,
Maria Kahlert
10.3897/mbmg.3.34002
12-06-2019
Unique: 4990 | Total: 20423
| Access Period:
Reprint: € 7,00
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Methods
Mu-DNA: a modular universal DNA extraction method adaptable for a wide range of sample types
Graham S. Sellers
,
Cristina Di Muri
,
Africa Gómez
,
Bernd Hänfling
10.3897/mbmg.2.24556
05-07-2018
Unique: 10836 | Total: 17940
| Access Period:
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Research Article
Quantitative monitoring of multispecies fish environmental DNA using high-throughput sequencing
Masayuki Ushio
,
Hiroaki Murakami
,
Reiji Masuda
,
Tetsuya Sado
,
Masaki Miya
,
Sho Sakurai
,
Hiroki Yamanaka
,
Toshifumi Minamoto
,
Michio Kondoh
10.3897/mbmg.2.23297
14-03-2018
Unique: 8352 | Total: 15794
| Access Period:
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Primer Validation
Short COI markers for freshwater macroinvertebrate metabarcoding
Ecaterina Vamos
,
Vasco Elbrecht
,
Florian Leese
10.3897/mbmg.1.14625
20-09-2017
Unique: 8631 | Total: 15330
| Access Period:
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Research Article
Dropping Hints: Estimating the diets of livestock in rangelands using DNA metabarcoding of faeces
Timothy Lee
,
Yohannes Alemseged
,
Andrew Mitchell
10.3897/mbmg.2.22467
14-03-2018
Unique: 4574 | Total: 13730
| Access Period:
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Software Description
Combining NCBI and BOLD databases for OTU assignment in metabarcoding and metagenomic datasets: The BOLD_NCBI _Merger
Jan-Niklas Macher
,
Till-Hendrik Macher
,
Florian Leese
10.3897/mbmg.1.22262
15-12-2017
Unique: 7246 | Total: 13435
| Access Period:
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Primer Validation
Development of a new set of PCR primers for eDNA metabarcoding decapod crustaceans
Tomoyuki Komai
,
Ryo O. Gotoh
,
Tetsuya Sado
,
Masaki Miya
10.3897/mbmg.3.33835
24-04-2019
Unique: 7647 | Total: 13191
| Access Period:
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Research Article
Choice of DNA extraction method affects DNA metabarcoding of unsorted invertebrate bulk samples
Markus Majaneva
,
Ola H. Diserud
,
Shannon H.C. Eagle
,
Mehrdad Hajibabaei
,
Torbjørn Ekrem
10.3897/mbmg.2.26664
23-08-2018
Unique: 7184 | Total: 11935
| Access Period:
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Research Article
Metabarcoding of soil nematodes: the importance of taxonomic coverage and availability of reference sequences in choosing suitable marker(s)
Mohammed Ahmed
,
Matthew Alan Back
,
Thomas Prior
,
Gerrit Karssen
,
Rebecca Lawson
,
Ian Adams
,
Melanie Sapp
10.3897/mbmg.3.36408
06-11-2019
Unique: 6182 | Total: 11858
| Access Period:
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Methods
A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy
Alexander M. Weigand
,
Jan-Niklas Macher
10.3897/mbmg.2.26869
23-08-2018
Unique: 6034 | Total: 11805
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Research Article
Estimating fish alpha- and beta-diversity along a small stream with environmental DNA metabarcoding
Yiyuan Li
,
Nathan T. Evans
,
Mark A. Renshaw
,
Christopher L. Jerde
,
Brett P. Olds
,
Arial J. Shogren
,
Kristy Deiner
,
David M. Lodge
,
Gary A. Lamberti
,
Michael E. Pfrender
10.3897/mbmg.2.24262
14-05-2018
Unique: 6492 | Total: 11749
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