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Software Description
Combining NCBI and BOLD databases for OTU assignment in metabarcoding and metagenomic datasets: The BOLD_NCBI _Merger
Jan-Niklas Macher
,
Till-Hendrik Macher
,
Florian Leese
10.3897/mbmg.1.22262
15-12-2017
Unique: 6099 | Total: 11142
| Access Period: 418
Reprint: € 2,60
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Research Article
Beyond fish eDNA metabarcoding: Field replicates disproportionately improve the detection of stream associated vertebrate species
Till-Hendrik Macher
,
Robin Schütz
,
Jens Arle
,
Arne J. Beermann
,
Jan Koschorreck
,
Florian Leese
Part of: DNA and eDNA methods for bioassessment and monitoring: Steps towards formal implementation
10.3897/mbmg.5.66557
13-07-2021
Unique: 2658 | Total: 4446
| Access Period: 416
Reprint: € 4,80
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Research Article
Plankton biodiversity and species co-occurrence based on environmental DNA – a multiple marker study
Sirje Sildever
,
Peeter Laas
,
Natalja Kolesova
,
Inga Lips
,
Urmas Lips
,
Satoshi Nagai
10.3897/mbmg.5.72371
03-11-2021
Unique: 1865 | Total: 3400
| Access Period: 416
Reprint: € 7,20
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R Package
BBI: an R package for the computation of Benthic Biotic Indices from composition data
Tristan Cordier
,
Jan Pawlowski
10.3897/mbmg.2.25649
05-07-2018
Unique: 4243 | Total: 40489
| Access Period: 415
Reprint: € 2,30
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Research Article
Using DNA metabarcoding to decipher the diet plant component of mammals from the Eastern Mediterranean region
Liliane Boukhdoud
,
Carole Saliba
,
Lillian D. Parker
,
Nancy Rotzel McInerney
,
Rhea Kahale
,
Issam Saliba
,
Jesús E. Maldonado
,
Magda Bou Dagher Kharrat
10.3897/mbmg.5.70107
20-12-2021
Unique: 1998 | Total: 3460
| Access Period: 408
Reprint: € 4,80
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Research Article
Maximizing the reliability and the number of species assignments in metabarcoding studies using a curated regional library and a public repository
Audrey Bourret
,
Claude Nozères
,
Eric Parent
,
Geneviève J. Parent
10.3897/mbmg.7.98539
23-02-2023
Unique: 456 | Total: 805
| Access Period: 404
Reprint: € 4,80
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Methods
Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life
Frédéric Rimet
,
Eva Aylagas
,
Angel Borja
,
Agnès Bouchez
,
Alexis Canino
,
Christian Chauvin
,
Teofana Chonova
,
Fedor Ciampor Jr
,
Filipe О. Costa
,
Benoit J. D. Ferrari
,
Romain Gastineau
,
Chloé Goulon
,
Muriel Gugger
,
Maria Holzmann
,
Regine Jahn
,
Maria Kahlert
,
Wolf-Henning Kusber
,
Christophe Laplace-Treyture
,
Florian Leese
,
Frederik Leliaert
,
David G. Mann
,
Frédéric Marchand
,
Vona Méléder
,
Jan Pawlowski
,
Serena Rasconi
,
Sinziana Rivera
,
Rodolphe Rougerie
,
Magali Schweizer
,
Rosa Trobajo
,
Valentin Vasselon
,
Régis Vivien
,
Alexander Weigand
,
Andrzej Witkowski
,
Jonas Zimmermann
,
Torbjørn Ekrem
10.3897/mbmg.5.58056
26-02-2021
Unique: 2973 | Total: 5136
| Access Period: 388
Reprint: € 5,90
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Research Article
Using DNA metabarcoding to investigate diet and niche partitioning in the native European otter (
Lutra lutra
) and invasive American mink (
Neovison vison
)
Lynsey R. Harper
,
Hayley V. Watson
,
Robert Donnelly
,
Richard Hampshire
,
Carl D. Sayer
,
Thomas Breithaupt
,
Bernd Hänfling
10.3897/mbmg.4.56087
26-11-2020
Unique: 2773 | Total: 5122
| Access Period: 387
Reprint: € 7,20
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Research Article
Spatial structure of fungal DNA assemblages revealed with eDNA metabarcoding in a forest river network in western Japan
Shunsuke Matsuoka
,
Yoriko Sugiyama
,
Hirotoshi Sato
,
Izumi Katano
,
Ken Harada
,
Hideyuki Doi
10.3897/mbmg.3.36335
10-07-2019
Unique: 3281 | Total: 5919
| Access Period: 380
Reprint: € 3,60
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Research Article
Choice of DNA extraction method affects DNA metabarcoding of unsorted invertebrate bulk samples
Markus Majaneva
,
Ola H. Diserud
,
Shannon H.C. Eagle
,
Mehrdad Hajibabaei
,
Torbjørn Ekrem
10.3897/mbmg.2.26664
23-08-2018
Unique: 5473 | Total: 9068
| Access Period: 369
Reprint: € 3,60
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Research Article
Can the Eurasian otter (
Lutra lutra
) be used as an effective sampler of fish diversity? Using molecular assessment of otter diet to survey fish communities
Hailong Dou
,
Mi Wang
,
Xuwang Yin
,
Limin Feng
,
Haitao Yang
10.3897/mbmg.7.96733
21-02-2023
Unique: 515 | Total: 851
| Access Period: 361
Reprint: € 5,90
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Research Article
Metabarcoding as an effective complement of microscopic studies in revealing the composition of the diatom community – a case study of an oxbow lake of Tisza River (Hungary) with the description of a new
Mayamaea
species
Tibor Bíró
,
Mónika Duleba
,
Angéla Földi
,
Keve T. Kiss
,
Péter Orgoványi
,
Zsuzsa Trábert
,
Edit Vadkerti
,
Carlos E. Wetzel
,
Éva Ács
10.3897/mbmg.6.87497
07-10-2022
Unique: 797 | Total: 1637
| Access Period: 351
Reprint: € 5,90
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