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Research Article
Geographic distance and mountain ranges structure freshwater protist communities on a European scalе
Jens Boenigk
,
Sabina Wodniok
,
Christina Bock
,
Daniela Beisser
,
Christopher Hempel
,
Lars Grossmann
,
Anja Lange
,
Manfred Jensen
10.3897/mbmg.2.21519
02-01-2018
Unique: 4340 | Total: 8602
| Access Period:
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Research Article
Read counts from environmental DNA (eDNA) metabarcoding reflect fish abundance and biomass in drained ponds
Cristina Di Muri
,
Lori Lawson Handley
,
Colin W. Bean
,
Jianlong Li
,
Graeme Peirson
,
Graham S. Sellers
,
Kerry Walsh
,
Hayley V. Watson
,
Ian J. Winfield
,
Bernd Hänfling
10.3897/mbmg.4.56959
22-10-2020
Unique: 4898 | Total: 8537
| Access Period:
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Research Article
Metabarcoding of soil nematodes: the importance of taxonomic coverage and availability of reference sequences in choosing suitable marker(s)
Mohammed Ahmed
,
Matthew Alan Back
,
Thomas Prior
,
Gerrit Karssen
,
Rebecca Lawson
,
Ian Adams
,
Melanie Sapp
10.3897/mbmg.3.36408
06-11-2019
Unique: 4186 | Total: 8158
| Access Period:
Reprint: € 7,20
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Research Article
Optimising the detection of marine taxonomic richness using environmental DNA metabarcoding: the effects of filter material, pore size and extraction method
Kristy Deiner
,
Jacqueline Lopez
,
Steve Bourne
,
Luke Holman
,
Mathew Seymour
,
Erin K. Grey
,
Anaïs Lacoursière
,
Yiyuan Li
,
Mark A. Renshaw
,
Michael E. Pfrender
,
Marc Rius
,
Louis Bernatchez
,
David M. Lodge
10.3897/mbmg.2.28963
02-11-2018
Unique: 4449 | Total: 7588
| Access Period:
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Applied Study
Using DNA metabarcoding for assessing chironomid diversity and community change in mosquito controlled temporary wetlands
Kathrin Theissinger
,
Anna Kästel
,
Vasco Elbrecht
,
Jenny Makkonen
,
Susanne Michiels
,
Susanne Schmidt
,
Stefanie Allgeier
,
Florian Leese
,
Carsten Brühl
10.3897/mbmg.2.21060
15-01-2018
Unique: 3702 | Total: 6798
| Access Period:
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Research Article
Functional and phylogenetic analysis of the core transcriptome of Ochromonadales
Nadine Graupner
,
Jens Boenigk
,
Christina Bock
,
Manfred Jensen
,
Sabina Marks
,
Sven Rahmann
,
Daniela Beisser
10.3897/mbmg.1.19862
20-09-2017
Unique: 3006 | Total: 6631
| Access Period:
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Software Description
Alignment-free classification of COI DNA barcode data with the Python package Alfie
Cameron M. Nugent
,
Sarah J. Adamowicz
10.3897/mbmg.4.55815
10-09-2020
Unique: 2624 | Total: 6624
| Access Period:
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Forum Paper
Advancing the use of molecular methods for routine freshwater macroinvertebrate biomonitoring – the need for calibration experiments
Rosetta C. Blackman
,
Elvira Mächler
,
Florian Altermatt
,
Amanda Arnold
,
Pedro Beja
,
Pieter Boets
,
Bastian Egeter
,
Vasco Elbrecht
,
Ana Filipa Filipe
,
J. Iwan Jones
,
Jan Macher
,
Markus Majaneva
,
Filipa M. S. Martins
,
Cesc Múrria
,
Kristian Meissner
,
Jan Pawlowski
,
Paul L. Schmidt Yáñez
,
Vera M.A. Zizka
,
Florian Leese
,
Benjamin Price
,
Kristy Deiner
10.3897/mbmg.3.34735
11-07-2019
Unique: 3598 | Total: 6217
| Access Period:
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Research Article
Development and evaluation of PCR primers for environmental DNA (eDNA) metabarcoding of Amphibia
Masayuki K. Sakata
,
Mone U. Kawata
,
Atsushi Kurabayashi
,
Takaki Kurita
,
Masatoshi Nakamura
,
Tomoyasu Shirako
,
Ryosuke Kakehashi
,
Kanto Nishikawa
,
Mohamad Yazid Hossman
,
Takashi Nishijima
,
Junichi Kabamoto
,
Masaki Miya
,
Toshifumi Minamoto
10.3897/mbmg.6.76534
21-02-2022
Unique: 3157 | Total: 6197
| Access Period:
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Research Article
Estimation of the relative abundance of species in artificial mixtures of insects using low-coverage shotgun metagenomics
Lidia Garrido-Sanz
,
Miquel Àngel Senar
,
Josep Piñol
10.3897/mbmg.4.48281
07-02-2020
Unique: 3897 | Total: 6175
| Access Period:
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Software Description
BOLDigger – a Python package to identify and organise sequences with the Barcode of Life Data systems
Dominik Buchner
,
Florian Leese
10.3897/mbmg.4.53535
03-06-2020
Unique: 3484 | Total: 6063
| Access Period:
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Research Article
The influence of macroinvertebrate abundance on the assessment of freshwater quality in The Netherlands
Kevin K. Beentjes
,
Arjen G. C. L. Speksnijder
,
Menno Schilthuizen
,
Bartholomeus E.M. Schaub
,
Berry B. van der Hoorn
10.3897/mbmg.2.26744
12-10-2018
Unique: 3541 | Total: 6038
| Access Period:
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