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Data Paper
COI amplicon sequence data of environmental DNA collected from the Bronx River Estuary, New York City
Eugenia Naro-Maciel
,
Melissa R. Ingala
,
Irena E. Werner
,
Brendan N. Reid
,
Allison M. Fitzgerald
10.3897/mbmg.6.80139
10-06-2022
Unique: 2762 | Total: 3987
| Access Period:
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Research Article
The bacterial hitchhiker’s guide to COI: Universal primer-based COI capture probes fail to exclude bacterial DNA, but 16S capture leaves metazoa behind
Sanni Hintikka
,
Jeanette E.L. Carlsson
,
Jens Carlsson
10.3897/mbmg.6.80416
31-05-2022
Unique: 3391 | Total: 4846
| Access Period:
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Research Article
A triad of kicknet sampling, eDNA metabarcoding, and predictive modeling to assess richness of mayflies, stoneflies and caddisflies in rivers
François Keck
,
Samuel Hürlemann
,
Nadine Locher
,
Christian Stamm
,
Kristy Deiner
,
Florian Altermatt
10.3897/mbmg.6.79351
10-05-2022
Unique: 3219 | Total: 4956
| Access Period:
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Research Article
Development and evaluation of PCR primers for environmental DNA (eDNA) metabarcoding of Amphibia
Masayuki K. Sakata
,
Mone U. Kawata
,
Atsushi Kurabayashi
,
Takaki Kurita
,
Masatoshi Nakamura
,
Tomoyasu Shirako
,
Ryosuke Kakehashi
,
Kanto Nishikawa
,
Mohamad Yazid Hossman
,
Takashi Nishijima
,
Junichi Kabamoto
,
Masaki Miya
,
Toshifumi Minamoto
10.3897/mbmg.6.76534
21-02-2022
Unique: 7961 | Total: 14101
| Access Period:
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Research Article
Plankton biodiversity and species co-occurrence based on environmental DNA – a multiple marker study
Sirje Sildever
,
Peeter Laas
,
Natalja Kolesova
,
Inga Lips
,
Urmas Lips
,
Satoshi Nagai
10.3897/mbmg.5.72371
03-11-2021
Unique: 4563 | Total: 7808
| Access Period:
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Data Paper
18S rRNA amplicon sequence data (V1–V3) of the Bronx river estuary, New York
Melissa R. Ingala
,
Irena E. Werner
,
Allison M. Fitzgerald
,
Eugenia Naro-Maciel
Part of: Advances in DNA and eDNA-based biomonitoring: Field & lab methods
10.3897/mbmg.5.69691
07-09-2021
Unique: 3182 | Total: 4908
| Access Period:
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Research Article
Metabarcoding of environmental samples suggest wide distribution of eelgrass (
Zostera marina
) pathogens in the north Pacific
Damian M. Menning
,
Hunter A. Gravley
,
Melissa N. Cady
,
Daniel Pepin
,
Sandy Wyllie-Echeverria
,
David H. Ward
,
Sandra L. Talbot
10.3897/mbmg.5.62823
09-04-2021
Unique: 2761 | Total: 4552
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Forum Paper
Advancing the use of molecular methods for routine freshwater macroinvertebrate biomonitoring – the need for calibration experiments
Rosetta C. Blackman
,
Elvira Mächler
,
Florian Altermatt
,
Amanda Arnold
,
Pedro Beja
,
Pieter Boets
,
Bastian Egeter
,
Vasco Elbrecht
,
Ana Filipa Filipe
,
J. Iwan Jones
,
Jan Macher
,
Markus Majaneva
,
Filipa M. S. Martins
,
Cesc Múrria
,
Kristian Meissner
,
Jan Pawlowski
,
Paul L. Schmidt Yáñez
,
Vera M.A. Zizka
,
Florian Leese
,
Benjamin Price
,
Kristy Deiner
10.3897/mbmg.3.34735
11-07-2019
Unique: 5741 | Total: 9627
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Primer Validation
Development of a new set of PCR primers for eDNA metabarcoding decapod crustaceans
Tomoyuki Komai
,
Ryo O. Gotoh
,
Tetsuya Sado
,
Masaki Miya
10.3897/mbmg.3.33835
24-04-2019
Unique: 9004 | Total: 15736
| Access Period:
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Research Article
Monitoring riverine fish communities through eDNA metabarcoding: determining optimal sampling strategies along an altitudinal and biodiversity gradient
Jonas Bylemans
,
Dianne M. Gleeson
,
Mark Lintermans
,
Christopher M. Hardy
,
Matthew Beitzel
,
Dean M. Gilligan
,
Elise M. Furlan
10.3897/mbmg.2.30457
31-12-2018
Unique: 6548 | Total: 12069
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Research Article
Optimising the detection of marine taxonomic richness using environmental DNA metabarcoding: the effects of filter material, pore size and extraction method
Kristy Deiner
,
Jacqueline Lopez
,
Steve Bourne
,
Luke Holman
,
Mathew Seymour
,
Erin K. Grey
,
Anaïs Lacoursière
,
Yiyuan Li
,
Mark A. Renshaw
,
Michael E. Pfrender
,
Marc Rius
,
Louis Bernatchez
,
David M. Lodge
10.3897/mbmg.2.28963
02-11-2018
Unique: 6616 | Total: 11370
| Access Period:
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Methods
A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy
Alexander M. Weigand
,
Jan-Niklas Macher
10.3897/mbmg.2.26869
23-08-2018
Unique: 6666 | Total: 13002
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