The bacterial hitchhiker’s guide to COI: Universal primer-based COI capture probes fail to exclude bacterial DNA, but 16S capture leaves metazoa behind

Sanni Hintikka; Jeanette E.L. Carlsson; Jens Carlsson

doi:10.3897/mbmg.6.80416

Research Article

Metabarcoding and Metagenomics 6: e80416
https://doi.org/10.3897/mbmg.6.80416 (31 May 2022)

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DeepCOI: a large language model-driven framework for fast and accurate taxonomic assignment in animal metabarcoding. Genome Biology 26: .

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Mosquitoes in small urban spaces: identification of blood meals and flight distances of engorged females in the southern Great Plains of the United States. Journal of Medical Entomology 62: 1200.

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Know your limits; miniCOI metabarcoding fails with key marine zooplankton taxa. Journal of Plankton Research 46: 581.

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Comparison of Short Generalist and Specific Markers to Assess the Diversity of Arthropods Using eDNA Metabarcoding. Environmental DNA 7: .

DOI: 10.1002/edn3.70225

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Improved COI taxonomic assignment workflow enhances detection of invertebrates in environmental DNA. Limnology and Oceanography: Methods : .

DOI: 10.1002/lom3.70021

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