Sven Weber, Manuel Stothut, Lisa Mahla, Alanah Kripp, Lena Hirschler, Nina Lenz, Anneke Junker, Sven Künzel, Henrik Krehenwinkel (2024)
Plant‐derived environmental DNA complements diversity estimates from traditional arthropod monitoring methods but outperforms them detecting plant–arthropod interactions.
Molecular Ecology Resources24: .
DOI: 10.1111/1755-0998.13900
Ondrej Vargovčík, Zuzana Čiamporová-Zaťovičová, Pavel Beracko, Jiří Kopáček, Patrik Macko, Kornélia Tuhrinová, Fedor Čiampor (2024)
Environmental gradients and optimal fixation time revealed with DNA metabarcoding of benthic sample fixative.
Scientific Reports14: .
DOI: 10.1038/s41598-024-68939-x
Dominik Buchner, James S. Sinclair, Manfred Ayasse, Arne J. Beermann, Jörn Buse, Frank Dziock, Julian Enss, Mark Frenzel, Thomas Hörren, Yuanheng Li, Michael T. Monaghan, Carsten Morkel, Jörg Müller, Steffen U. Pauls, Ronny Richter, Tobias Scharnweber, Martin Sorg, Stefan Stoll, Sönke Twietmeyer, Wolfgang W. Weisser, Benedikt Wiggering, Martin Wilmking, Gerhard Zotz, Mark O. Gessner, Peter Haase, Florian Leese (2025)
Upscaling biodiversity monitoring: Metabarcoding estimates 31,846 insect species from Malaise traps across Germany.
Molecular Ecology Resources25: .
DOI: 10.1111/1755-0998.14023
Mandy Sander, Arne J. Beermann, Dominik Buchner, Iris Madge Pimentel, James S. Sinclair, Martina Weiss, Peter Haase, Florian Leese (2024)
Environmental DNA time series analysis of a temperate stream reveals distinct seasonal community and functional shifts.
River Research and Applications40: 850.
DOI: 10.1002/rra.4265
Álvaro Fueyo, Omar Sánchez, Ruth Coya, Carlos Carleos, Amando Escudero, Javier Cordón, Sara Fernández, Javier Granero-Castro, Yaisel J. Borrell (2024)
The influence of databases enrichment using local macroinvertebrate genetic references for metabarcoding based biodiversity studies in river monitoring.
Ecological Indicators158: 111454.
DOI: 10.1016/j.ecolind.2023.111454
Mandy Sander, Arne J. Beermann, Dominik Buchner, Martina Weiss, Marie‐Thérése Werner, Florian Leese (2025)
Capture—Incubate—Release: An Animal‐Friendly Approach to Assess Local Aquatic Macroinvertebrate Species Diversity Through Environmental DNA Metabarcoding.
Environmental DNA7: .
DOI: 10.1002/edn3.70112
Lisa Wolany, Julian Enss, Florian Leese, Dominik Buchner (2024)
Homogenization of insect bulk samples yields more comprehensive yet comparable biodiversity data than non-destructive lysis.
Metabarcoding and Metagenomics8: .
DOI: 10.3897/mbmg.8.129814
Dominik Buchner, Till-Hendrik Macher, Arne J. Beermann, Marie-Thérése Werner, Florian Leese (2021)
Standardized high-throughput biomonitoring using DNA metabarcoding: Strategies for the adoption of automated liquid handlers.
Environmental Science and Ecotechnology8: 100122.
DOI: 10.1016/j.ese.2021.100122
Álvaro Fueyo, Omar Sánchez, Carlos Carleos, Amando Escudero, Javier Cordón, Javier Granero‐Castro, Yaisel Juan Borrell (2024)
Unlocking rivers' hidden diversity and ecological status using DNA metabarcoding in Northwest Spain.
Ecology and Evolution14: .
DOI: 10.1002/ece3.70110
Till-Hendrik Macher, Jens Arle, Arne J. Beermann, Lina Frank, Kamil Hupało, Jan Koschorreck, Robin Schütz, Florian Leese (2024)
Is it worth the extra mile? Comparing environmental DNA and RNA metabarcoding for vertebrate and invertebrate biodiversity surveys in a lowland stream.
PeerJ12: e18016.
DOI: 10.7717/peerj.18016
Vera M. A. Zizka, Matthias F. Geiger, Thomas Hörren, Ameli Kirse, Niklas W. Noll, Livia Schäffler, Alice M. Scherges, Martin Sorg (2022)
Repeated subsamples during DNA extraction reveal increased diversity estimates in DNA metabarcoding of Malaise traps.
Ecology and Evolution12: .
DOI: 10.1002/ece3.9502
Aleida Ascenzi, Lorenz Wührl, Vivian Feng, Nathalie Klug, Christian Pylatiuk, Pierfilippo Cerretti, Rudolf Meier (2025)
EntoSieve: Automated Size‐Sorting of Insect Bulk Samples to Aid Accurate Megabarcoding and Metabarcoding.
Molecular Ecology Resources
: .
DOI: 10.1111/1755-0998.14097
Jorge Machuca-Sepúlveda, Javiera Miranda, Nicolás Lefin, Alejandro Pedroso, Jorge F. Beltrán, Jorge G. Farias (2023)
Current Status of Omics in Biological Quality Elements for Freshwater Biomonitoring.
Biology12: 923.
DOI: 10.3390/biology12070923
Ameli Kirse, Sarah J. Bourlat, Kathrin Langen, Björn Zapke, Vera M. A. Zizka (2023)
Comparison of destructive and nondestructiveDNAextraction methods for the metabarcoding of arthropod bulk samples.
Molecular Ecology Resources23: 92.
DOI: 10.1111/1755-0998.13694
Nina Röder, Klaus Schwenk (2023)
Direct PCR meets high-throughput sequencing – metabarcoding of chironomid communities without DNA extraction.
Metabarcoding and Metagenomics7: .
DOI: 10.3897/mbmg.7.102455
Iris Madge Pimentel, Daria Baikova, Dominik Buchner, Andrea Burfeid Castellanos, Gwendoline M. David, Aman Deep, Annemie Doliwa, Una Hadžiomerović, Ntambwe A. Serge Mayombo, Sebastian Prati, Marzena Agata Spyra, Anna-Maria Vermiert, Daniela Beisser, Micah Dunthorn, Jeremy J. Piggott, Bernd Sures, Scott D. Tiegs, Florian Leese, Arne J. Beermann (2024)
Assessing the response of an urban stream ecosystem to salinization under different flow regimes.
Science of The Total Environment926: 171849.
DOI: 10.1016/j.scitotenv.2024.171849
Physilia Y.S. Chua, Sarah J. Bourlat, Cameron Ferguson, Petra Korlevic, Leia Zhao, Torbjørn Ekrem, Rudolf Meier, Mara K.N. Lawniczak (2023)
Future of DNA-based insect monitoring.
Trends in Genetics39: 531.
DOI: 10.1016/j.tig.2023.02.012
Nicole Remmel, Dominik Buchner, Julian Enss, Viktor Hartung, Florian Leese, Ellen A. R. Welti, James S. Sinclair, Peter Haase (2024)
DNA metabarcoding and morphological identification reveal similar richness, taxonomic composition and body size patterns among flying insect communities.
Insect Conservation and Diversity17: 449.
DOI: 10.1111/icad.12710
Fabricio dos Anjos Santa Rosa, Maria A. Gasalla, Anna Karolina Oliveira de Queiroz, Talita Fernanda Augusto Ribas, Quentin Mauvisseau, Hugo J. de Boer, Birgitte Lisbeth Graae Thorbek, Renato Renison Moreira Oliveira, Marcele Laux, Felippe A. Postuma, Jonathan Stuart Ready (2024)
Molecular analyses of carangid fish diets reveal inter‐predation, dietary overlap, and the importance of early life stages in trophic ecology.
Ecology and Evolution14: .
DOI: 10.1002/ece3.10817