Research Article
Metabarcoding and Metagenomics 2: e26664
https://doi.org/10.3897/mbmg.2.26664 (23 Aug 2018)
https://doi.org/10.3897/mbmg.2.26664 (23 Aug 2018)
Other versions:
- ContentsContents
- Article InfoArticle Info
- CiteCite
- MetricsMetrics
- CommentComment
- RelatedRelated
- FigsFigs
- MapMap
- TaxaTaxa
- DataData
- RefsRefs
- CitedCited
Development of a cost-effective, morphology-preserving method for DNA isolation from bulk invertebrate trap catches: Tephritid fruit flies as an exemplar. PLOS ONE 18: e0281759.
DOI: 10.1371/journal.pone.0281759
Modelling technical and biological biases in macroinvertebrate community assessment from bulk preservative using multiple metabarcoding markers. Molecular Ecology 30: 3221.
DOI: 10.1111/mec.15620
Studying Ecosystems With DNA Metabarcoding: Lessons From Biomonitoring of Aquatic Macroinvertebrates. Frontiers in Ecology and Evolution 7: .
DOI: 10.3389/fevo.2019.00434
Issues of under-representation in quantitative DNA metabarcoding weaken the inference about diet of the tundra vole Microtus oeconomus. PeerJ 9: e11936.
DOI: 10.7717/peerj.11936
Comparative evaluation of DNA extraction from rice’s root-associated bacterial consortium for population structure study. E3S Web of Conferences 302: 02014.
DOI: 10.1051/e3sconf/202130202014
Future of DNA-based insect monitoring. Trends in Genetics : .
DOI: 10.1016/j.tig.2023.02.012
Long-term archival of environmental samples empowers biodiversity monitoring and ecological research. Environmental Sciences Europe 34: .
DOI: 10.1186/s12302-022-00618-y
Replicate DNA metabarcoding can discriminate seasonal and spatial abundance shifts in river macroinvertebrate assemblages . Molecular Ecology Resources : .
DOI: 10.1111/1755-0998.13794
Have the cake and eat it: Optimizing nondestructive DNA metabarcoding of macroinvertebrate samples for freshwater biomonitoring. Molecular Ecology Resources 19: 863.
DOI: 10.1111/1755-0998.13012
Development of a new set of PCR primers for eDNA metabarcoding decapod crustaceans. Metabarcoding and Metagenomics 3: .
DOI: 10.3897/mbmg.3.33835
Advancing the use of molecular methods for routine freshwater macroinvertebrate biomonitoring – the need for calibration experiments. Metabarcoding and Metagenomics 3: .
DOI: 10.3897/mbmg.3.34735
Towards routine DNA metabarcoding of macroinvertebrates using bulk samples for freshwater bioassessment: Effects of debris and storage conditions on the recovery of target taxa. Freshwater Biology 65: 607.
DOI: 10.1111/fwb.13443
Cooking small and large portions of “biodiversity‐soup”: Miniaturized DNA metabarcoding PCRs perform as good as large‐volume PCRs. Ecology and Evolution 11: 9092.
DOI: 10.1002/ece3.7753
National eDNA-based monitoring of Batrachochytrium dendrobatidis and amphibian species in Norway. Metabarcoding and Metagenomics 6: .
DOI: 10.3897/mbmg.6.85199
Ethanol eDNA Reveals Unique Community Composition of Aquatic Macroinvertebrates Compared to Bulk Tissue Metabarcoding in a Biomonitoring Sampling Scheme. Diversity 13: 34.
DOI: 10.3390/d13010034
Comparison of destructive and nondestructive DNA extraction methods for the metabarcoding of arthropod bulk samples . Molecular Ecology Resources 23: 92.
DOI: 10.1111/1755-0998.13694
Optimized DNA isolation from marine sponges for natural sampler DNA metabarcoding . Environmental DNA 5: 438.
DOI: 10.1002/edn3.392
A practical guide to DNA metabarcoding for entomological ecologists. Ecological Entomology 45: 373.
DOI: 10.1111/een.12831
Metabarcoding unsorted kick‐samples facilitates macroinvertebrate‐based biomonitoring with increased taxonomic resolution, while outperforming environmental DNA. Environmental DNA 3: 353.
DOI: 10.1002/edn3.116
Using unsorted sweep-net samples to rapidly assess macroinvertebrate biodiversity. Freshwater Science 40: 551.
DOI: 10.1086/716215
Evaluating restoration trajectories using DNA metabarcoding of ground‐dwelling and airborne invertebrates and associated plant communities. Molecular Ecology 31: 2172.
DOI: 10.1111/mec.16375
The first comprehensive DNA barcode reference library of Chinese Tanytarsus (Diptera: Chironomidae) for environmental DNA metabarcoding . Diversity and Distributions 27: 1932.
DOI: 10.1111/ddi.13209
Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods. GigaScience 11: .
DOI: 10.1093/gigascience/giac065
Promises and pitfalls of using high‐throughput sequencing for diet analysis. Molecular Ecology Resources 19: 327.
DOI: 10.1111/1755-0998.12960
Establishing arthropod community composition using metabarcoding: Surprising inconsistencies between soil samples and preservative ethanol and homogenate from Malaise trap catches. Molecular Ecology Resources 19: 1516.
DOI: 10.1111/1755-0998.13071
Wet grinding of invertebrate bulk samples – a scalable and cost-efficient protocol for metabarcoding and metagenomics. Metabarcoding and Metagenomics 5: .
DOI: 10.3897/mbmg.5.67533
Developing Indicators of Nutrient Pollution in Streams Using 16S rRNA Gene Metabarcoding of Periphyton-Associated Bacteria. Water 14: 2361.
DOI: 10.3390/w14152361
DNA metabarcoding adds valuable information for management of biodiversity in roadside stormwater ponds. Ecology and Evolution 9: 9712.
DOI: 10.1002/ece3.5503
DNA metabarcoding unravels unknown diversity and distribution patterns of tropical freshwater invertebrates . Freshwater Biology 67: 1411.
DOI: 10.1111/fwb.13926
Repeated subsamples during DNA extraction reveal increased diversity estimates in DNA metabarcoding of Malaise traps . Ecology and Evolution 12: .
DOI: 10.1002/ece3.9502
Encyclopedia of Inland Waters. : 537.
DOI: 10.1016/B978-0-12-819166-8.00131-6