Research Article
Metabarcoding and Metagenomics 1: e19862
https://doi.org/10.3897/mbmg.1.19862 (20 Sep 2017)
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  • ContentsContents
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  • Introduction
  • Material and methods
    • Cultivation of strains and RNA isolation
    • Sequencing, assembly and annotation
    • Comparative analysis of core, shared and exclusive genes
    • Pathway analysis
    • Expression analysis
    • Phylogenetic analysis
  • Data resources
  • Results
    • General aspects - Transcriptome sizes and functional assignment
    • Comparison of strains
    • Core transcriptome
    • Phylogenetic inference
  • Discussion
    • The chrysophyte core transcriptome – the essential minority
    • Gene function interferes with phylogenetic signals in tree topologies
  • Conclusions
  • Acknowledgements
  • References
  • Supplementary files
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