Research Article
Metabarcoding and Metagenomics 8: e123387
https://doi.org/10.3897/mbmg.8.123387 (23 Jul 2024)
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  • ContentsContents
  • Article InfoArticle Info
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  • CommentComment
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  • FigsFigs
  • TaxaTaxa
  • DataData
  • RefsRefs
  • CitedCited
  • Article title
  • Abstract
  • Key words
  • Introduction
  • Methods
    • Site description
    • Sample collection
    • Nematode isolation and identification
    • mtMG sample preparation and DNA extraction
    • Library prep and sequencing
    • Mitochondrial read processing
    • Haplotype identification and error contig filtering
    • mtMG community identification
    • Biodiversity metrics
    • Statistics
  • Results
    • Relationships amongst variables
    • Tree based filtering of mitochondrial contigs
    • Mitochondrial haplotype detection
    • Recovered taxa
    • Morphology vs. mtMG: Richness
    • Morphology vs. mtMG: Composition
  • Discussion
    • General methods comparison
    • Comparing field findings
    • Comparing depth findings
  • Conclusion
  • Acknowledgements
  • Additional information
    • Conflict of interest
    • Ethical statement
    • Funding
    • Author contributions
    • Author ORCIDs
    • Data availability
  • References
  • Supplementary materials
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