Research Article
Metabarcoding and Metagenomics 7: e109085
https://doi.org/10.3897/mbmg.7.109085 (20 Nov 2023)
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  • ContentsContents
  • Article InfoArticle Info
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  • Article title
  • Abstract
  • Key words
  • Introduction
  • Methods
    • Sample collection and genetic material extraction for sequencing
    • Read-based bioinformatic analysis
    • Identification of pathogens and endosymbionts
    • Analysis of correlation and abundance
    • Virulence factors and resistance markers
    • Bioinformatic analysis for the construction of metagenomes (MAGs)
    • Pangenome and comparative genomics of MAGs
    • Functional analysis of MAGs
  • Results
    • Read-based bioinformatic analysis
    • Identification of pathogens and endosymbionts in the samples
    • Analysis of correlation and abundance
    • Virulence factors and resistance markers
    • Bioinformatic analysis for the construction of metagenomes (MAGs)
  • Discussion
  • Conclusion
  • Acknowledgments
  • Additional information
    • Conflict of interest
    • Ethical statement
    • Funding
    • Author contributions
    • Author ORCIDs
    • Data availability
  • References
  • Supplementary materials
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